Description | Female (range) | Male (range) | All (range) |
---|---|---|---|
Gross mapping yield (Gb) | 206 (160–280) | 202 (168–249) | 206 (160–280) |
Fully called genome fraction | 95.13% (91%/97%) | 95.89% (94%/97%) | 95.13% (91%/97%) |
Partially called genome fraction | 0.96% (0%/2%) | 0.69% (0%/1%) | 0.96% (0%/2%) |
No-called genome fraction | 3.91% (3%/7%) | 3.42% (2%/5%) | 3.91% (2%/7%) |
SNP total count | 3257897 (2966002–3396520) | 3275018 (3056972–3495143) | 3257897 (2966002–3495143) |
SNP novel rate | 6.71% (6%/7%) | 6.78% (6%/9%) | 6.71% (6%/9%) |
 Synonymous SNP | 9239 (8668–9564) | 9229 (8503–9821) | 9239 (8503–9821) |
 Missense SNP | 9046 (8348–9456) | 9037 (8380–9574) | 9046 (8348–9574) |
 Nonsense SNP | 96 (86–117) | 95 (77–110) | 96 (77–117) |
 Nonstop SNP | 24 (19–29) | 22 (17–26) | 24 (17–29) |
INS total count | 180040 (152082–208451) | 190177 (160473–209226) | 180040 (152082–209226) |
INS novel rate | 21.31% (19%/23%) | 21.58% (19%/23%) | 21.31% (19%/23%) |
 Frame-shifting INS | 134 (113–157) | 130 (95–152) | 134 (95–157) |
 Frame-preserving INS | 116 (96–132) | 117 (98–130) | 116 (96–132) |
DEL total count | 192550 (157937–217782) | 202085 (166805–227228) | 192550 (157937–227228) |
DEL novel rate | 23.85% (23%/25%) | 23.75% (22%/26%) | 23.85% (22%/26%) |
 Frame-shifting DEL | 117 (96–144) | 110 (86–126) | 117 (86–144) |
 Frame-preserving DEL | 120 (100–138) | 115 (106–128) | 120 (100–138) |
SUB total count | 68020 (56179–75040) | 69396 (59319–76699) | 68020 (56179–76699) |
SUB novel rate | 34.07% (31%/38%) | 33.96% (31%/37%) | 34.07% (31%/38%) |
 Frame-shifting SUB | 21 (11–27) | 19 (14–26) | 21 (11–27) |
 Frame-preserving SUB | 259 (208–320) | 252 (225–279) | 259 (208–320) |