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Table 1 List of SNPs

From: A base-calling algorithm for Tm-shifted melting curve SNP assay

ID

Gene Symbol

SNP

Allele (A/B)

SNP1

 

rs2241796

T/C

SNP2

TGFBRAP1

rs1866040

G/A

SNP3

 

rs2576737

A/G

SNP4

 

rs518604

C/T

SNP5

CASP5

rs2282658

C/G

SNP6

 

rs484345

A/G

SNP7

 

rs1699087

G/T

SNP8

ADAR

rs903323

T/C

SNP9

IFI44

rs2070123

T/C

SNP10

 

rs305067

G/C

SNP11

ICSBP1

rs305088

A/G

SNP12

 

rs870614

G/A

  1. These SNPs were assayed by both the sequencing and the McSNP methods for the demonstration of proposed algorithm.