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Table 2 SNP-specific calling performance

From: A base-calling algorithm for Tm-shifted melting curve SNP assay

 

SNP 1

SNP 2

SNP 3

SNP 4

SNP 5

SNP 6

SNP 7

SNP 8

SNP 9

SNP 10

SNP 11

SNP 12

No calls

0

0

0

0

0

1

1

0

0

0

0

0

# discordant calls

0

0

0

0

1

4

0

0

0

0

0

0

Concordance rate (%)

100

100

100

100

97.7

90.7

100

100

100

100

100

100

  1. The number of no calls, discordant calls and the concordance rates between the proposed algorithm and the sequencing method