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Figure 3 | Journal of Clinical Bioinformatics

Figure 3

From: Huvariome: a web server resource of whole genome next-generation sequencing allelic frequencies to aid in pathological candidate gene selection

Figure 3

Huvariome genotype frequency page. The output page giving the distribution of allelic variations in the Diversity Panel of genomes for the European (CEU) and African (ASW) populations. In this example the first ten positions that were queried from the cardiomyopathy data set from Meder et al. 2011 [25] are shown. Each variant is returned per row with the frequency of each genotype highlighted by the size of the associated blue bar. Abbreviations: chromosome (chr); 0-based location (pos); reference allele (ref); variant alleles 1 and 2 (a1, a2); indels (ins, del); substitutions (sub); no-call (unkn.); no-call rate (nc rate); external reference (xref); predicted amino acid change (impact); gene symbol (gsym); gene component (comp), e.g. exon, intron; and variant from database of genomic variants (dgv).

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