From: mCOPA: analysis of heterogeneous features in cancer expression data
Feature selection + clustering method | Datasets* (Details presented in Additional file1– Public datasets) | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Pr | C | Mn | R1 | R2 | NPh | Lm | R3 | B | T | Br | L | |
COPA+CH | 0.12 | 0.04 | 0.69 | 0.20 | 0.64 | 0.15 | 0.23 | 0.38 | 0.06 | 0.05 | 0.16 | 0.45 |
COPA+KM | 0.30 | 0.16 | 0.53 | 0.62 | 0.33 | 0.31 | 0.25 | 0.54 | 0.09 | 0.23 | 0.12 | 0.41 |
COPA+PAM | 0.13 | 0.18 | 0.60 | 0.90 | 0.81 | 0.36 | 0.26 | 0.57 | −0.02 | 0.31 | 0.12 | 0.35 |
COPA+SIL | 0.04 | 0.08 | 0.69 | 0.20 | 0.30 | 0.15 | 0.33 | 0.43 | 0.06 | 0.05 | 0.07 | 0.55 |
DE+CH | 0.17 | 0.15 | 0.21 | 0.24 | 0.53 | 0.36 | 0.38 | 0.28 | 0.21 | 0.52 | 0.12 | 0.44 |
DE+KM | 0.29 | 0.15 | 0.51 | 0.75 | 0.59 | 0.34 | 0.38 | 0.65 | 0.27 | 0.63 | 0.12 | 0.54 |
DE+PAM | 0.35 | 0.13 | 0.24 | 0.79 | 0.76 | 0.34 | 0.26 | 0.56 | 0.11 | 0.46 | 0.16 | 0.43 |
DE+SIL | 0.17 | 0.15 | 0.33 | 0.24 | 0.53 | 0.14 | 0.38 | 0.28 | 0.21 | 0.52 | 0.12 | 0.44 |
mCOPA+CH | 0.29 | 0.15 | 0.60 | 0.55 | 0.40 | 0.35 | 0.38 | 0.39 | 0.06 | 0.52 | 0.11 | 0.30 |
mCOPA+KM | 0.46 | 0.01 | 0.79 | 0.68 | 0.48 | 0.36 | 0.45 | 0.85 | 0.00 | 0.63 | 0.08 | 0.62 |
mCOPA+PAM | 0.47 | 0.10 | 0.55 | 0.82 | 0.54 | 0.45 | 0.44 | 0.49 | 0.03 | 0.50 | 0.20 | 0.44 |
mCOPA+SIL | 0.29 | 0.14 | 0.60 | 0.61 | 0.40 | 0.35 | 0.38 | 0.39 | 0.06 | 0.52 | 0.11 | 0.30 |
VAR+CH | 0.14 | 0.08 | 0.69 | 0.32 | 0.34 | 0.28 | 0.38 | 0.57 | 0.02 | 0.26 | 0.13 | 0.45 |
VAR+KM | 0.16 | 0.16 | 0.47 | 0.81 | 0.47 | 0.23 | 0.34 | 0.64 | 0.09 | 0.15 | 0.17 | 0.41 |
VAR+PAM | 0.17 | 0.16 | 0.88 | 0.81 | 0.43 | 0.02 | 0.26 | 0.61 | 0.10 | 0.06 | 0.15 | 0.33 |
VAR+SIL | 0.14 | 0.08 | 0.69 | 0.89 | 0.34 | 0.28 | 0.38 | 0.57 | 0.02 | 0.12 | 0.13 | 0.59 |